Browsing by Author "Rudi, Knut"
Now showing items 1-20 of 43
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A diet change from dry food to beef induces reversible changes on the faecal microbiota in healthy, adult, client-owned dogs
Herstad, Kristin; Gajardo, Karina; Bakke, Anne Marie; Moe, Lars; Ludvigsen, Jane; Rudi, Knut; Rud, Ida; Sekelja, Monika; Skancke, Ellen (Journal article; Peer reviewed, 2017) -
Age-Dependent Fecal Bacterial Correlation to Inflammatory Bowel Disease for Newly Diagnosed Untreated Children
Nwosu, Felix; Thorkildsen, Lill-Therese; Avershina, Ekaterina; Ricanek, Petr; Perminow, Gøri; Brackmann, Stephan; Vatn, Morten H; Rudi, Knut (Journal article; Peer reviewed, 2013)The knowledge about correlation patterns between the fecal microbiota and inflammatory bowel diseases (IBD)—comprising the two subforms Crohn’s disease (CD) and ulcerative colitis (UC)—for newly diagnosed untreated children ... -
An investigation of wild-type P1 prophage induction
Ormaasen, Ida (Master thesis, 2019)The spread of antibiotic resistance genes is increasing, and the mechanisms involved need to be established. Connections between the temperate bacteriophage P1 and antibiotic resistance genes have been implied. Therefore, ... -
A stable core gut microbiota across fresh- to saltwater transition for farmed Atlantic salmon
Rudi, Knut; Angell, Inga Leena; Pope, Phillip; Vik, Jon Olav; Sandve, Simen Rød; Snipen, Lars-Gustav (Journal article; Peer reviewed, 2017) -
Atlantic salmon raised with diets low in long-chain polyunsaturated n-3 fatty acids in freshwater have a Mycoplasma-dominated gut microbiota at sea
Jin, Yang; Angell, Inga Leena; Sandve, Simen Rød; Snipen, Lars-Gustav; Olsen, Yngvar; Rudi, Knut (Journal article; Peer reviewed, 2019) -
Breastfeeding associated microbiota in human milk following supplementation with Lactobacillus rhamnosus GG, Lactobacillus acidophilus La-5 and Bifidobacterium animalis subspecies lactis Bb-12
Simpson, Melanie Rae; Avershina, Ekaterina; Storrø, Ola; Johnsen, Roar; Rudi, Knut; Øien, Torbjørn (Journal article; Peer reviewed, 2017)Breastfeeding is one of the major factors affecting the early development of the infant gut microbiota, and weaning is associated with a shift in the gut microbiota toward a more adult composition. Through breastfeeding, ... -
Carbohydrate utilization and short chain fatty acid production in Bifidobacteria
Mielnicka, Kasia (Master thesis, 2019)In the first stage of life infants go through rapid growth and development and have high nutritional needs. During this first 6 months of life breast milk is considered to provide a complete postnatal nutrition. Positive ... -
Characterization of conjugative plasmids in the gut microbiota from a preterm twin pair
Hagbø, Mari Elisabeth Sørås (Master thesis, 2017)The increasing spread of antibiotic resistance genes is becoming one of the most challenging issues for human health worldwide. The human gut holds a very high density of bacteria, which allows high rates of gene transmissions ... -
Characterization of Lactic Acid Bacteria from infants gut with antimicrobial activity against Lactobacillus rhamnosus GG
Andersen, Amanda Morken (Master thesis, 2018)There are major individual differences in how the probiotic strain Lactobacillus rhamnosus GG (LGG) colonizes the intestine of infants. Understanding these differences will be of great importance in relation to the use of ... -
Characterization of the infant gut microbiota mobilome
Ravi, Anuradha (PhD thesis;2017:37, Doctoral thesis, 2017)The human gut is densely populated with a wide diversity of bacteria. These bacteria can serve as a reservoirs for multiple Antibiotic Resistance (AR) genes that in turn are associated with wide range of Mobile Genetic ... -
Characterization of the microbiota composition associated with the hias continuous biofilm process
Goa, Inger Andrea Nesbø (Master thesis, 2018)Fosforrensing av avløpsvann er essensielt for å unngå eutrofiering som forstyrrer økosystem i overflatevann. Den vanligste behandlingsprosessen har vært kjemisk utfelling. Ulemper med denne prosessen, derimot, er at fosfor ... -
Comparisons of infant Escherichia coli isolates link genomic profiles with adaptation to the ecological niche
De Muinck, Eric; Lagesen, Karin; Afset, Jan Egil; Didelot, Xavier; Rønningen, Kjersti Skjold; Rudi, Knut; Stenseth, Nils Christian; Trosvik, Pål (Journal article; Peer reviewed, 2013)Despite being one of the most intensely studied model organisms, many questions still remain about the evolutionary biology and ecology of Escherichia coli. An important step toward achieving a more complete understanding ... -
Detection of fungi with Liquid Array Diagnostics in dysbiotic patients
Gulczynska, Zuzanna (Master thesis, 2019)Tarmmikrobiota dysbiose forbindes med diverse medisinske tilstander, inkludert inflammatorisk tarmsykdom (IBD) og irritabel tarmsyndrom (IBS). Som følge av mange år med omfattende forskning innen tarmmikrobiota, er noen ... -
Diversity of vaginal microbiota increases by the time of labor onset
Avershina, Ekaterina; Slangsvold, Silje; Simpson, Melanie Rae; Storrø, Ola; Johnsen, Roar; Øien, Torbjørn; Rudi, Knut (Journal article; Peer reviewed, 2017) -
Early gut mycobiota and mother-offspring transfer
Schei, Kasper; Avershina, Ekaterina; Øien, Torbjørn; Rudi, Knut; Follestad, Turid; Salamati, Saideh; Ødegård, Rønnaug (Journal article; Peer reviewed, 2017) -
Effekt av hybridassembly på genomer med shuffloner og repeterte områder
Degnes, Maren-Helene Høie (Master thesis, 2019)Antibiotikaresistens spres mest effektivt mellom bakterier via konjugasjon, men konjugasjon forutsetter at bakteriene binder seg godt nok til hverandre. IncI1-plasmidet er et konjugativt plasmid og inneholder et område ... -
Evaluation of Liquid Array Diagnostics for microbiota-based diagnosis of dysbiosis
Amlie, Katrine (Master thesis, 2018)The human gut contains a complex community of microorganisms that impact our health and general well-being. Based on observed microbial patterns, a balanced composition can be defined, known as normobiosis. Deviations from ... -
Evaluation of long-read Nanopore sequencing in genome studies
Strand, Thomas Dailey (Master thesis, 2017)The development of the latest generation of sequencing technologies, known as third-generation sequencing, has revolutionized sequence assembly due to long reads compared to the short reads of second-generation sequencing ... -
Exploring the brine microbiota of a traditional Norwegian fermented fish product (Rakfisk) from six different producers during two consecutive seasonal productions
Bjerke, Guro alette; Rudi, Knut; Avershina, Ekaterina; Moen, Birgitte; Blom, Hans; Axelsson, Lars Torsten (Journal article; Peer reviewed, 2019)The purpose of this study was to explore the microbiota of Norwegian fermented fish (rakfisk), a traditional product popular in the Norwegian market. Brine samples, collected from six producers during two subsequent years, ... -
Faecal short-chain fatty acids - a diagnostic biomarker for irritable bowel syndrome?
Farup, Per Grønaas; Rudi, Knut; Hestad, Knut (Journal article; Peer reviewed, 2016)Background The diagnosis of irritable bowel syndrome (IBS) relies on symptom-based criteria. A valid and reliable biomarker that could confirm the diagnosis is desirable. This study evaluated the properties of faecal ...