• microclass: An R-package for 16S taxonomy classification 

      Liland, Kristian Hovde; Vinje, Hilde; Snipen, Lars-Gustav (Journal article; Peer reviewed, 2017)
      Background Taxonomic classification based on the 16S rRNA gene sequence is important for the profiling of microbial communities. In addition to giving the best possible accuracy, it is also important to quantify uncertainties ...
    • PRECOG: a tool for automated extraction and visualization of fitness components in microbial growth phenomics. 

      Fernandez-Ricaud, Luciano; Kourtchenko, Olga; Zackrisson, Martin; Warringer, Jonas; Blomberg, Anders (Journal article; Peer reviewed, 2016)
      BACKGROUND: Phenomics is a field in functional genomics that records variation in organismal phenotypes in the genetic, epigenetic or environmental context at a massive scale. For microbes, the key phenotype is the growth ...