Blar i Brage NMBU på forfatter "Sandve, Simen Rød"
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Evolution of cold acclimation and its role in niche transition in the temperate grass subfamily Pooideae
Schubert, Marian; Grønvold, Lars; Sandve, Simen Rød; Hvidsten, Torgeir Rhoden; Fjellheim, Siri (Peer reviewed; Journal article, 2019) -
Evolution of gene expression following the whole genome duplication in salmonid fish
Gillard, Gareth Benjamin (PhD Thesis;2019:53, Doctoral thesis, 2019)Whole genome duplication (WGD) is a rare mutational event that provides additional duplicates of all genes in the entire genome, resulting in functional redundancy. This redundancy leads to relaxation of selective constraints ... -
Exploring host-microbiome interactions in Norwegian Salmon via weighted network analysis
Strand, Marius André (Master thesis, 2019)Invisible to the naked eye, but present everywhere. Microbial organisms live and reproduce in almost any conceivable environment on the planet. In recent years, researchers have started to gain quantified information of ... -
Extracting functional trends from whole genome duplication events using comparative genomics
Hermansen, Russell A.; Hvidsten, Torgeir Rhoden; Sandve, Simen Rød; Liberles, David A. (Journal article; Peer reviewed, 2016) -
The Farmed Atlantic Salmon (Salmo salar) Skin-Mucus Proteome and Its Nutrient Potential for the Resident Bacterial Community
Minniti, Giusi; Sandve, Simen Rød; Padra, JT; Hagen., Live Heldal; Lindén, S; Pope, Phillip; Arntzen, Magnus Øverlie; Vaaje-Kolstad, Gustav (Peer reviewed; Journal article, 2019)Norway is the largest producer and exporter of farmed Atlantic salmon (Salmo salar) worldwide. Skin disorders correlated with bacterial infections represent an important challenge for fish farmers due to the economic losses ... -
Functional Annotation of All Salmonid Genomes (FAASG): an international initiative supporting future salmonid research, conservation and aquaculture
Macqueen, Daniel J.; Primmer, Craig R.; Houston, Ross D.; Nowak, Barbara F.; Bernatchez, Louis; Bergseth, Steinar; Davidson, William S.; Gallardo-Escárate, Cristian; Goldammer, Tom; Guiguen, Yann; Iturra, Patricia; Kijas, James W.; Koop, Ben F.; Lien, Sigbjørn; Maass, Alejandro; Martin, Samuel A. M.; McGinnity, Philip; Montecino, Martin; Naish, Kerry; Nichols, Krista M.; Ólafsson, Kristinn; Omholt, Stig William; Palti, Yniv; Plastow, Graham S.; Rexroad, Caird E. 3rd; Rise, Matthew L.; Ritchie, Rachael J.; Sandve, Simen Rød; Schulte, Patricia M.; Tello, Alfredo; Vidal, Rodrigo; Vik, Jon Olav; Wargelius, Anna; Yáñez, José Manuel (Journal article; Peer reviewed, 2017)We describe an emerging initiative - the ‘Functional Annotation of All Salmonid Genomes’ (FAASG), which will leverage the extensive trait diversity that has evolved since a whole genome duplication event in the salmonid ... -
Functional interrogation of the elovl5 gene regulation in Atlantic salmon
Ema, Shawline (Master thesis, 2022)Long-chain polyunsaturated fatty acids (LC-PUFA) and cholesterol are important for different physiological pathways including immunology. As these cannot be synthesized in the teleosts including Salmon itself, food supplement ... -
Genetics of Pooideae freezing tolerance : an evolutionary perspective
Sandve, Simen Rød (PhD Thesis;2010:37, Doctoral thesis, 2010)Freezing tolerance is an important agricultural trait for forage and cereal grasses belonging to the Pooideae sub-family. Many plants, including the Pooideae grasses, go through a cold acclimation (CA) process when exposed ... -
Genome-Wide Reconstruction of Rediploidization Following Autopolyploidization across One Hundred Million Years of Salmonid Evolution
Gundappa, Manu Kumar; To, Thu-Hien; Grønvold, Lars; Martin, Samuel A. M.; Lien, Sigbjørn; Geist, Jürgen; Hazlerigg, David; Sandve, Simen Rød; Macqueen, Daniel J. (Peer reviewed; Journal article, 2021) -
Genomic regions and signaling pathways associated with indicator traits for feed efficiency in Atlantic salmon (Salmo salar)
Dvergedal, Hanne; Harvey, Thomas Nelson; Jin, Yang; Ødegård, Jørgen; Grønvold, Lars; Sandve, Simen Rød; Våge, Dag Inge; Moen, Thomas; Klemetsdal, Gunnar (Peer reviewed; Journal article, 2020) -
Genomic structural variations as drivers of adaptation in salmonid fishes
Stenløkk, Kristina Severine Rudskjær (PhD Thesis;2023:26, Doctoral thesis, 2023)Structural variations (SVs), e.g. deletions, insertions, inversions and duplications of sequences, are a major source of genomic variation affecting more base pairs in the genome than single nucleotide polymorphisms (SNPs). ... -
The grayling genome reveals selection on gene expression regulation after whole-genome duplication
Varadharajan, Srinidhi; Sandve, Simen Rød; Gillard, Gareth Benjamin; Tørresen, Ole K.; Mulugeta, Teshome Dagne; Hvidsten, Torgeir Rhoden; Lien, Sigbjørn; Vøllestad, Leif Asbjørn; Jentoft, Sissel; Nederbragt, Alexander Johan; Jakobsen, Kjetill Sigurd (Peer reviewed; Journal article, 2018)Whole-genome duplication (WGD) has been a major evolutionary driver of increased genomic complexity in vertebrates. One such event occurred in the salmonid family ∼80 Ma (Ss4R) giving rise to a plethora of structural and ... -
Homeolog regulation in hexaploid wheat
Hallsberg, Ine Birgitta (Master thesis, 2016-09-15)Bread wheat (Triticum aestivum L.) is an allohexaploid hybrid composed of three closely related diploid subgenomes (AABBDD, 2n=6x=42). For most genes, bread wheat therefore has three gene copies, referred to as homeolog ... -
Identification of 121 variants of honey bee Vitellogenin protein sequences with structural differences at functional sites
Leipart, Vilde; Ludvigsen, Jane; Kent, Matthew Peter; Sandve, Simen Rød; To, Thu-Hien; Arnyasi, Mariann; Kreibich, Claus D; Dahle, Bjørn Steinar; Amdam, Gro Vang (Peer reviewed; Journal article, 2022) -
Immunologic Profiling of the Atlantic Salmon Gill by Single Nuclei Transcriptomics
West, Alexander Christopher; Mizoro, Yasutaka; Wood, Shona; Ince, Louise M.; Iversen, Marianne; Jørgensen, Even Hjalmar; Nome, Torfinn; Sandve, Simen Rød; Martin, Samuel A. M.; Loudon, Andrew S. I.; Hazlerigg, David (Peer reviewed; Journal article, 2021) -
Integration of mate pair sequences to improve shotgun assemblies of flow-sorted chromosome arms of hexaploid wheat
Belova, Tatiana; Zhan, Bujie; Wright, Jonathan; Caccamo, Mario; Asp, Torben; Simkova, Hana; Kent, Matthew Peter; Bendixen, Christian; Panitz, Frank; Lien, Sigbjørn; Dolezel, Jaroslav; Olsen, Odd-Arne; Sandve, Simen Rød (Journal article; Peer reviewed, 2013) -
Life-stage associated remodeling of lipid metabolism regulation in Atlantic salmon
Gillard, Gareth Benjamin; Harvey, Thomas Nelson; Gjuvsland, Arne Bjørke; Jin, Yang; Thomassen, Magny Sissel S.; Lien, Sigbjørn; Leaver, Michael; Torgersen, Jacob Seilø; Hvidsten, Torgeir Rhoden; Vik, Jon Olav; Sandve, Simen Rød (Journal article; Peer reviewed, 2018) -
Lineage-specific rediploidization is a mechanism to explain time-lags between genome duplication and evolutionary diversification
Robertson, Fiona M; Gundappa, Manu Kumar; Grammes, Fabian; Hvidsten, Torgeir Rhoden; Redmond, Anthony K; Lien, Sigbjørn; Martin, Samuel AM; Holland, Peter WH; Sandve, Simen Rød; Macqueen, Daniel J (Journal article; Peer reviewed, 2017) -
Liver slice culture as a model for lipid metabolism in fish
Harvey, Thomas Nelson; Sandve, Simen Rød; Jin, Yang; Vik, Jon Olav; Torgersen, Jacob Seilø (Peer reviewed; Journal article, 2019) -
Low effect of β-mannan on gene regulation in Atlantic salmon
Skog, Marte (Master thesis, 2022)In this thesis the effect of the prebiotic β-mannan on the molecular function of different tissues in Atlantic salmon was tested. As the fiber has proven metabolism-promoting effects in other terrestrial animals and humans, ...