Browsing Brage NMBU by Author "Sandve, Simen Rød"
Now showing items 1-20 of 62
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A stable core gut microbiota across fresh- to saltwater transition for farmed Atlantic salmon
Rudi, Knut; Angell, Inga Leena; Pope, Phillip; Vik, Jon Olav; Sandve, Simen Rød; Snipen, Lars-Gustav (Journal article; Peer reviewed, 2017) -
A systemic study of lipid metabolism regulation in salmon fingerlings and early juveniles fed plant oil
Jin, Yang; Olsen, Rolf Erik; Gillard, Gareth B.; Østensen, Mari-Ann; Korsvoll, Sven A.; Santi, Nina; Vik, Jon Olav; Sandve, Simen Rød; Olsen, Yngvar (Journal article; Peer reviewed, 2018) -
Analyses of Genome Regulatory Evolution Following Whole-Genome Duplication Using the Phylogenetic EVE Model
Arzumanova, Ksenia; Rohlfs, Rori V; Grønvold, Lars; Strand, Marius Andre; Hvidsten, Torgeir Rhodén; Sandve, Simen Rød (Journal article; Peer reviewed, 2023) -
Assessment of genetic diversity in plants intended for enrichment planting compared to natural regeneration : a case study in Fjugstad Nature Reserve
Timilsina, Bishnu (Master thesis, 2023)European ash (Fraxinus excelsior) is facing severe population decline due to ash dieback disease, which not only poses a threat to the existence of this keystone species but also to more than 480 other species associated ... -
Association of gut microbiota with metabolism in juvenile Atlantic salmon
Dvergedal, Hanne; Sandve, Simen Rød; Angell, I.L.; Klemetsdal, Gunnar; Rudi, Knut (Peer reviewed; Journal article, 2020)The gut microbiome plays a key role in animal health and metabolism through the intricate functional interconnection between the feed, gut microbes, and the host. Unfortunately, in aquaculture, the links between gut microbes ... -
Atlantic salmon raised with diets low in long-chain polyunsaturated n-3 fatty acids in freshwater have a Mycoplasma-dominated gut microbiota at sea
Jin, Yang; Angell, Inga Leena; Sandve, Simen Rød; Snipen, Lars-Gustav; Olsen, Yngvar; Rudi, Knut (Journal article; Peer reviewed, 2019) -
Characterization of genes and proteins related to chitin metabolism in Atlantic salmon
Holen, Matilde Mengkrog (PhD Thesis;2022:46, Doctoral thesis, 2022)Chitin is an insoluble polysaccharide and important component in the extracellular matrix of invertebrates such as arthropods, algae, and fungi. In vertebrates, the role and significance of chitin have not been deeply ... -
Chromosome-Level Genome Assembly of Chinese Sucker (Myxocyprinus asiaticus) Reveals Strongly Conserved Synteny Following a Catostomid-Specific Whole-Genome Duplication
Krabbenhoft, Trevor; MacGuigan, Daniel J.; Backenstose, Nathan J. C.; Waterman, Hannah; Lan, Tianying; Pelosi, Jessie A.; Tan, Milton; Sandve, Simen Rød (Journal article, 2021) -
Comparative regulomics supports pervasive selection on gene dosage following whole genome duplication
Gillard, Gareth Benjamin; Grønvold, Lars; Røsæg, Line Lieblein; Holen, Matilde Mengkrog; Monsen, Øystein; Koop, Ben F.; Rondeau, Eric B.; Gundappa, Manu Kumar; Mendoza, John; Macqueen, Daniel J.; Rohlfs, Rori V.; Sandve, Simen Rød; Hvidsten, Torgeir Rhoden (Peer reviewed; Journal article, 2021) -
Comparative transcriptomics reveals domestication‐associated features of Atlantic salmon lipid metabolism
Jin, Yang; Olsen, Rolf Erik; Harvey, Thomas Nelson; Østensen, Mari-Ann; Li, Keshuai; Santi, Nina; Vadstein, Olav; Bones, Atle M.; Vik, Jon Olav; Sandve, Simen Rød; Olsen, Yngvar (Peer reviewed; Journal article, 2020) -
Comparative transcriptomics reveals domestication‐associated features of Atlantic salmon lipid metabolism
Jin, Yang; Olsen, Rolf Erik; Harvey, Thomas Nelson; Østensen, Mari-Ann; Li, Keshuai; Santi, Nina; Vadstein, Olav; Bones, Atle M.; Vik, Jon Olav; Sandve, Simen Rød; Olsen, Yngvar (Peer reviewed; Journal article, 2020) -
CRISPR based functional characterization of the abcg2b gene contribution to muscle pigmentation in Atlantic salmon
Wagnerberger, Johanna Henny (Master thesis, 2020)Red flesh coloration is an important trademark of salmon meat and commonly associated with its quality. The colour intensity is largely controlled by diet composition and mainly caused by the red pigment astaxanthin, which ... -
Deciphering transcriptional regulation using deep neural networks
Førrisdal, Julie Wollebæk (Master thesis, 2023)The DNA holds the recipe of all life functions. To decipher the instructions, one has to learn and understand its complex syntax. The non-coding DNA contains regulatory elements, that are essential to control and activate ... -
Diet and Life Stage-Associated Lipidome Remodeling in Atlantic Salmon
Jin, Yang; Harvey, Thomas Nelson; Bartosova, Zdenka; Hassani, Sahar; Bruheim, Per; Sandve, Simen Rød; Vik, Jon Olav (Peer reviewed; Journal article, 2021) -
Diversified regulation of circadian clock gene expression following whole genome duplication
West, Alexander Christopher; Iversen, Marianne; Jørgensen, Even Hjalmar; Sandve, Simen Rød; Hazlerigg, David; Wood, Shona Hiedi (Peer reviewed; Journal article, 2020) -
The establishment of a CRISPR-Cas13a diagnostic assay for SARS-CoV-2 detection
Krog, Charlotte Solum (Master thesis, 2020)The scarcity of fast and reliable tests in diagnostic laboratories for detection of pathogens with high sensitivity is a significant disadvantage particularly for critically ill patients. Given the global health crisis ... -
Evaluation of machine learning methods to decode transcriptional regulation
Jeyakumar, Harini (Master thesis, 2023)With large biological measurements made possible by the development of high-throughput technology, it allows for the study of genomic data. In transcriptional regulation the cell controls the translation of DNA to RNA, and ... -
Evidence for adaptive evolution of low-temperature stress response genes in a Pooideae grass ancestor
Vigeland, Magnus Dehli; Spannagl, Manuel; Asp, Torben; Paina, Cristiana; Rudi, Heidi; Rognli, Odd Arne; Fjellheim, Siri; Sandve, Simen Rød (Journal article; Peer reviewed, 2013) -
Evolution of adaptations to temperate climate in the grass subfamily Pooideae
Schubert, Marian (PhD Thesis;2016:89, Doctoral thesis, 2016)Temperate biomes are characterized by strong temperature and photoperiod seasonality and frequently occurring frost. Temperate plants have evolved to overcome challenges like cold stress, prolonged winters and short ... -
Evolution of alternative splice variation and exon usage following whole genome duplication
Sandholm, Ronja Marlonsdotter (Master thesis, 2022)Whole genome duplication and alternative splicing are two mechanisms that contribute to protein diversity. Whole genome duplication doubles the genetic material in an organism, providing raw material for adaptation and ...